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Molecular phylogenomic analysis reveals a single origin of monkeypox virus transmission in Guangzhou, China

September 15th, 2023
monkeypox, mpox
Colorized transmission electron micrograph of mpox virus particles (red) cultivated and purified from cell culture. Image captured at the NIAID Integrated Research Facility (IRF) in Fort Detrick, Maryland. Credit: NIAID

The monkeypox (mpox) virus has caused worldwide transmission since its initial report in England in early May 2022. Available data from the World Health Organization (WHO) show that Europe and the Americas experienced a huge wave of mpox virus infection.

Now the number of infected cases is on the rise in Asia. Several sporadic infections have been reported in China. In a new study published in Biosafety and Health, researchers obtained high-quality whole viral genomic sequences using a mpox virus-specific amplicon-based sequencing strategy.

The analysis of the phylogenomic characteristics indicated that all eight mpox virus sequences from Guangzhou belonged to the clade IIb lineage B.1.3 cluster. However, the exact origin where the virus was imported could not be located, based on all the available mpox virus sequences from the Global Initiative on Sharing Avian Influenza Data (GISAID) database (https://gisaid.org/), except for their closest sequence similarity to that was reported from Japan. Novel amino acid mutations were found among the eight cases, suggesting that a local transmission may have occurred in Guangzhou, China.

More information:
Mengling Jiang et al, Molecular phylogenomic analysis reveals a single origin of monkeypox virus transmission in Guangzhou, China in June 2023, Biosafety and Health (2023). DOI: 10.1016/j.bsheal.2023.08.002

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